DisGeNET - a database of gene-disease associations

List of associated variants

Secondary malignant neoplasm of lymph node, C0686619

Source: ALL

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs8371	XIAP	0.925	0.120	X	123912065	3 prime UTR variant	C/T	snv	0.25	0.19	4
rs9856	XIAP	0.925	0.120	X	123911791	3 prime UTR variant	C/T	snv	0.57		4
rs135745		0.763	0.200	22	38287631	downstream gene variant	G/C	snv		0.48	13
rs2236142	HSCB ; CHEK2	0.827	0.120	22	28741956	5 prime UTR variant	G/C	snv		0.66	6
rs738792	MMP11	0.827	0.240	22	23779191	missense variant	C/T	snv	0.84	0.80	6
rs28382575	MMP11	0.851	0.120	22	23783502	synonymous variant	T/C	snv	2.2E-02	1.8E-02	5
rs738722	CHEK2	0.882	0.120	22	28734024	intron variant	T/C	snv		0.67	4
rs184432	TFF1	0.882	0.120	21	42367453	upstream gene variant	G/A	snv		0.64	3
rs2253319	RUNX1	0.882	0.120	21	34815749	intron variant	C/G;T	snv			3
rs225359	TFF1	0.882	0.120	21	42367327	upstream gene variant	G/A	snv		0.62	3
rs34904192	MIR155HG	1.000	0.080	21	25569623	intron variant	G/A	snv		0.12	1
rs13042395	SLC52A3	0.752	0.160	20	773867	intron variant	C/T	snv		5.9E-02	13
rs6024836	FAM210B ; AURKA	0.851	0.160	20	56369012	downstream gene variant	G/A	snv		0.42	7
rs2064863	AURKA	0.925	0.120	20	56387716	intron variant	T/A;C;G	snv			4
rs13181	KLC3 ; ERCC2	0.487	0.760	19	45351661	stop gained	T/A;G	snv	4.0E-06; 0.32		134
rs1800470	TGFB1	0.515	0.840	19	41353016	missense variant	G/A;C	snv	0.55; 2.4E-04		107
rs11615	ERCC1	0.572	0.640	19	45420395	synonymous variant	A/G	snv	0.50	0.55	62
rs895819	MIR23A ; LOC284454 ; MIR27A ; MIR24-2	0.623	0.560	19	13836478	non coding transcript exon variant	T/A;C;G	snv	0.34	0.38	46
rs1047781	LOC105447645 ; FUT2	0.790	0.200	19	48703374	missense variant	A/T	snv	3.6E-02	1.2E-02	11
rs11671784	MIR24-2 ; LOC284454 ; MIR23A ; MIR27A	0.790	0.240	19	13836482	non coding transcript exon variant	G/A	snv	1.2E-02	1.2E-02	9
rs2288947	TINCR	0.827	0.160	19	5562104	3 prime UTR variant	G/A	snv		0.45	5
rs1799817	INSR	0.851	0.200	19	7125286	synonymous variant	G/A	snv	0.23	0.21	4
rs3218038	CCNE1	0.882	0.120	19	29814988	intron variant	G/T	snv		9.1E-02	4
rs10420252	COX6B1	1.000	0.080	19	35648270	upstream gene variant	G/A	snv		9.7E-02	2
rs6510502	COX6B1	1.000	0.080	19	35647577	upstream gene variant	A/C;G	snv			2